Identifying regions enriched in a chip-seq data set (Peak finding)

Jui-Hung Hung; Zhiping Weng

doi:10.1101/pdb.prot093187

Identifying regions enriched in a chip-seq data set (Peak finding)

Jui-Hung Hung, Zhiping Weng

研究成果: Article › 同行評審

5 引文斯高帕斯（Scopus）

摘要

This protocol demonstrates how to use MACS software to call peaks in a ChIP-seq data set. MACS is one of the most widely used peak-calling programs. The protocol describes how to run MACS in a UNIX environment and on Galaxy and how to extract the sequences of ±50 bp around the summits of the 500 MACS peaks with the most significant P values.

原文	English
頁（從 - 到）	165-172
頁數	8
期刊	Cold Spring Harbor Protocols
卷	2017
發行號	2
DOIs	https://doi.org/10.1101/pdb.prot093187
出版狀態	Published - 2月 2017

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10.1101/pdb.prot093187

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Identifying regions enriched in a chip-seq data set (Peak finding)

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