Generating transcriptional regulatory networks from time-ordered stem cell differentiation RNA sequencing data

Yu Shuen Tsai, Yao Ming Chang, Yang Mooi Lim, Soon Keng Cheong, I. Fang Chung*, Chee Yin Wong

*此作品的通信作者

研究成果: Article同行評審

摘要

We describe steps to 1) identify ascending and descending monotonic key genes from time-ordered stem cell differentiation expression data, 2) construct time-ordered transcriptional regulatory networks, and 3) infer the involvement of transcription factors along the differentiation process. For complete details on the use and execution of this protocol, please refer to Wong et al. (2020).

原文English
文章編號101541
期刊STAR Protocols
3
發行號3
DOIs
出版狀態Published - 16 9月 2022

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