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Efficient GPU-based algorithm for aligning huge sequence database
Chun Yuan Lin,
Che Lun Hung
, Jen Cheng Huang
生物醫學資訊研究所
研究成果
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Conference contribution
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同行評審
1
引文 斯高帕斯(Scopus)
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Keyphrases
Alignment Approach
33%
Biological Computing
33%
Computing Capabilities
33%
Computing Science
33%
CPU Computing
33%
CUD A
33%
Dynamic Programming Algorithm
66%
Filtration Mechanism
33%
GenBank
33%
GPU Algorithms
100%
GPU Computing
66%
GPU-based
33%
NVIDIA Tesla
33%
Optimal Alignment
33%
Sequence Alignment
66%
Sequence Alignment Algorithms
33%
Sequence Database
100%
Smith-Waterman Algorithm
100%
Smith-Waterman Alignment
33%
Speedup Ratio
33%
Computer Science
Consuming Computation
25%
Dynamic Programming
25%
Dynamic Programming Algorithm
25%
Experimental Result
25%
Graphics Processing Unit
100%
Optimal Alignment
25%
Programming Method
25%
Sequence Alignment
75%
Sequence Database
100%
Waterman Algorithm
75%