Cloud computing service framework for bioinformatics tools

Guan Jie Hua, Chuan Yi Tang, Che Lun Hung, Yaw Ling Lin

研究成果: Conference contribution同行評審

2 引文 斯高帕斯(Scopus)

摘要

With the rapid growth of biological technology, large amount of biological data can be produced in few days or months. Many of common-used tools become computation-consuming in analyzing such big biological data. Cloud computing has emerged to provide the huge amount of computing power and play important role in development of bioinformatics tools. We propose a cloud computing framework that is able to easily deploy the bioinformatics tools on cloud virtualization platform based on Hadoop. This framework can work on the public cloud platform vendor such as Amazon EC2 and also private cloud platform. All the tools performed by cloud computing framework as Bioinformatics as a Services are available at http://bioinfo.cs.pu.edu.tw/CBBTS. The tools deployed on cloud platform by the proposed framework are tested in Providence University cloud platform and provided good proportional acceleration when scaled out onto many computational units. In the big biological data era, cloud computing based solutions are important role to develop bioinformatics services over internet. In the work, the proposed framework is able to simply deploy several well-known bioinformatics tools on cloud virtualization platform and as web services. This framework can work on the public cloud platform vendor such as Amazon EC2 and also private cloud platform.

原文English
主出版物標題Proceedings - 2015 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2015
編輯lng. Matthieu Schapranow, Jiayu Zhou, Xiaohua Tony Hu, Bin Ma, Sanguthevar Rajasekaran, Satoru Miyano, Illhoi Yoo, Brian Pierce, Amarda Shehu, Vijay K. Gombar, Brian Chen, Vinay Pai, Jun Huan
發行者Institute of Electrical and Electronics Engineers Inc.
頁面1509-1513
頁數5
ISBN(電子)9781467367981
DOIs
出版狀態Published - 16 12月 2015
事件IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2015 - Washington, United States
持續時間: 9 11月 201512 11月 2015

出版系列

名字Proceedings - 2015 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2015

Conference

ConferenceIEEE International Conference on Bioinformatics and Biomedicine, BIBM 2015
國家/地區United States
城市Washington
期間9/11/1512/11/15

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