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A 75.6M Base-pairs/s FPGA Accelerator for FM-index Based Paired-end Short-Read Mapping
Chung Hsuan Yang
,
Yi Chung Wu
, Yen Lung Chen
, Chao Hsi Lee
,
Jui Hung Hung
, Chia Hsiang Yang
電子研究所
數據科學與工程研究所
研究成果
:
Conference contribution
›
同行評審
2
引文 斯高帕斯（Scopus）
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Keyphrases
FM-index
100%
Index-based
100%
Paired-end
100%
FPGA Acceleration
100%
Short-read Mapping
100%
High-throughput
40%
Short Reads
40%
Performance Improvement
20%
Memory Efficiency
20%
Biomedical Applications
20%
Research Application
20%
Heterogeneous Systems
20%
Execution Time
20%
Succeeding
20%
Subsequence
20%
Genotype Calling
20%
Next-generation Sequencing
20%
Human DNA
20%
Genetic Research
20%
Massively Parallel
20%
Genome Sequence Analysis
20%
CPU-FPGA
20%
Variant Calling
20%
Analysis Workflow
20%
Haplotype Calling
20%
Variant Genotypes
20%
Engineering
Field Programmable Gate Arrays
100%
Performance Improvement
25%
Execution Time
25%
Biomedical Application
25%
Prior Art
25%
Subsequence
25%
Heterogeneous System
25%
Computer Science
Field Programmable Gate Arrays
100%
High Throughput
50%
Performance Improvement
25%
Heterogeneous System
25%
Execution Time
25%
Material Science
Next Generation Sequencing
100%