Forecast-based sample preparation algorithm for unbalanced splitting correction on DMFBs

Ling Yen Song, Yi Ling Chen, Yung Chun Lei, Juinn Dar Huang

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

1 Scopus citations

Abstract

Sample preparation is regarded as one of essential processing steps in most biochemical assays. In the past decade, numerous techniques have been presented to deal with sample preparation under the (1:1) mixing model on digital microfluidic biochips (DMFBs) for various optimization goals. However, most of previous works assumed that mixing-then-splitting would get two identical output droplets, which is not always true due to unbalanced splitting. As a consequence, those works may fail to provide correct solutions at the presence of unbalanced splitting. Several methods have been proposed to deal with this issue. Nevertheless, some of them rely on hypotheses that may not be practical, while the others demand extra reactants or special hardware. In this paper, we propose a new probability-based sample preparation algorithm for unbalanced splitting correction. Our new algorithm not only guarantees a correct solution, but requires neither extra reactants nor on-chip special hardware. Experimental results show that the effect of unbalanced splitting can be eliminated only at the cost of 20% more operation steps. That is, the proposed algorithm is both reliable and efficient.

Original languageEnglish
Title of host publicationProceedings - 2019 IEEE International Conference on Computer Design, ICCD 2019
PublisherInstitute of Electrical and Electronics Engineers Inc.
Pages422-428
Number of pages7
ISBN (Electronic)9781538666487
DOIs
StatePublished - Nov 2019
Event37th IEEE International Conference on Computer Design, ICCD 2019 - Abu Dhabi, United Arab Emirates
Duration: 17 Nov 201920 Nov 2019

Publication series

NameProceedings - 2019 IEEE International Conference on Computer Design, ICCD 2019

Conference

Conference37th IEEE International Conference on Computer Design, ICCD 2019
Country/TerritoryUnited Arab Emirates
CityAbu Dhabi
Period17/11/1920/11/19

Keywords

  • Correction on demand
  • Digital microfluidic biochip
  • Forecast-based correction
  • Probability-based forecast
  • Sample preparation
  • Unbalanced splitting

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