TY - JOUR
T1 - Counting phylogenetic networks with few reticulation vertices
T2 - Tree-child and normal networks
AU - Fuchs, Michael
AU - Gittenberger, Bernhard
AU - Mansouri, Marefatollah
PY - 2019/2/1
Y1 - 2019/2/1
N2 - In recent decades, phylogenetic networks have become a standard tool in modeling evolutionary processes. Nevertheless, basic combinatorial questions about them are still largely open. For instance, even the asymptotic counting problem for the class of phylogenetic networks and subclasses is unsolved. In this paper, we propose a method based on generating functions to count networks with few reticulation vertices for two subclasses which are important in applications: tree-child networks and normal networks. In particular, our method can be used to completely solve the asymptotic counting problem for these network classes when the number of reticulation vertices remains fixed while the network size tends to infinity.
AB - In recent decades, phylogenetic networks have become a standard tool in modeling evolutionary processes. Nevertheless, basic combinatorial questions about them are still largely open. For instance, even the asymptotic counting problem for the class of phylogenetic networks and subclasses is unsolved. In this paper, we propose a method based on generating functions to count networks with few reticulation vertices for two subclasses which are important in applications: tree-child networks and normal networks. In particular, our method can be used to completely solve the asymptotic counting problem for these network classes when the number of reticulation vertices remains fixed while the network size tends to infinity.
UR - http://www.scopus.com/inward/record.url?scp=85067913932&partnerID=8YFLogxK
M3 - Article
AN - SCOPUS:85067913932
SN - 1034-4942
VL - 73
SP - 385
EP - 423
JO - Australasian Journal of Combinatorics
JF - Australasian Journal of Combinatorics
IS - 2
ER -