Personal profile
Research Interests
NGS data analysis and integrated interpretation, Annotation of new genomes and comparative genomics based data mining, Human gene expression profile analysis and regulatory circuit reconstruction
Education/Academic qualification
PhD, Biomedical Informatics, University of Cambridge
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Collaborations and top research areas from the last five years
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Antiviral therapy reduces hepatocellular carcinoma through suppressing hepatitis B virus replication may improve ER stress, mitochondrial and metabolic dysfunctions and decrease p62 in hybridized mice with single HBV transgene and miR-122
Liang, Y. J., Chiou, Y. W., Chiu, A. P. T., Shiao, M. S., Teng, W., Lin, C. W., Cheng, M. L., Huang, Y. H., Liang, K. H., Su, C. W., Lai, C. Y., Chen, C. L. & Wu, J. C., Dec 2023, In: Journal of Medical Virology. 95, 12, e29325.Research output: Contribution to journal › Article › peer-review
8 Scopus citations -
Deconvolution of bulk gene expression profiles reveals the association between immune cell polarization and the prognosis of hepatocellular carcinoma patients
Chiu, Y. J., Ni, C. E. & Huang, Y. H., Jul 2023, In: Cancer Medicine. 12, 14, p. 15736-15760 25 p.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
HArmonized single-cell RNA-seq Cell type Assisted Deconvolution (HASCAD)
Chiu, Y. J., Ni, C. E. & Huang, Y. H., Oct 2023, In: BMC Medical Genomics. 16, 272.Research output: Contribution to journal › Article › peer-review
Open Access4 Scopus citations -
TSSUNet-MB – ab initio identification of σ70 promoter transcription start sites in Escherichia coli using deep multitask learning
Ni, C. E., Doan, D. P., Chiu, Y. J. & Huang, Y. H., Aug 2023, In: Computational Biology and Chemistry. 105, 107904.Research output: Contribution to journal › Article › peer-review
Open Access -
Gene coexpression network analysis identifies hubs in hepatitis B virus-associated hepatocellular carcinoma
Wang, S. Y., Huang, Y. H., Liang, Y. J. & Wu, J. C., 1 Oct 2022, In: Journal of the Chinese Medical Association. 85, 10, p. 972-980 9 p.Research output: Contribution to journal › Article › peer-review
Open Access5 Scopus citations