Projects per year
Personal profile
Research Interests
Metaprogramming, Parallel computing and hardware-assisted acceleration algorithm, Bioinformatics and next generation sequencing algorithm, Data analysis and visualization in complex systems, Image processing and deep learning
Experience
1.Associate professor, National Chiao Tung University 2015 ~
2.Assistant professor, National Chiao Tung University 2012 ~ 2015
3.Post-doctoral researcher, University of Massachusetts Medical School 2011 ~ 2012
Education/Academic qualification
PhD, Boston University
External positions
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Network
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Innovating string-to-graph alignment and genome-guided transcriptome assembly algorithms for the thrid generation sequencin
1/08/22 → 31/07/23
Project: Government Ministry › Other Government Ministry Institute
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Innovating string-to-graph alignment and genome-guided transcriptome assembly algorithms for the thrid generation sequencin
1/08/23 → 31/07/24
Project: Government Ministry › Other Government Ministry Institute
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Innovating string-to-graph alignment and genome-guided transcriptome assembly algorithms for the thrid generation sequencin
1/08/21 → 31/07/22
Project: Government Ministry › Other Government Ministry Institute
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Developing Circuits Of Gene Expression Quantification Algorithms Based On RNA-seq
1/01/21 → 31/12/21
Project: Government Ministry › Other Government Ministry Institute
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The Functional Implication Of Non-Templated Nucleotide Addition Of miRNAs In Motor Neuron Development
1/08/20 → 31/07/21
Project: Government Ministry › Other Government Ministry Institute
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A 75.6M Base-pairs/s FPGA Accelerator for FM-index Based Paired-end Short-Read Mapping
Yang, C. H., Wu, Y. C., Chen, Y. L., Lee, C. H., Hung, J. H. & Yang, C. H., 2022, 2022 IEEE Asian Solid-State Circuits Conference, A-SSCC 2022 - Proceedings. Institute of Electrical and Electronics Engineers Inc., (2022 IEEE Asian Solid-State Circuits Conference, A-SSCC 2022 - Proceedings).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review
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Estimating intraclonal heterogeneity and subpopulation changes from bulk expression profiles in CMap
Hsieh, C. Y., Tu, C. C. & Hung, J. H., Oct 2022, In: Life Science Alliance. 5, 10, e202101299.Research output: Contribution to journal › Article › peer-review
Open Access2 Scopus citations -
A 975-mW Fully Integrated Genetic Variant Discovery System-on-Chip in 28 nm for Next-Generation Sequencing
Wu, Y. C., Chen, Y. L., Yang, C. H., Lee, C. H., Yu, C. Y., Chang, N. S., Chen, L. C., Chang, J. R., Lin, C. P., Chen, H. L., Chen, C. S., Hung, J. H. & Yang, C. H., Jan 2021, In: IEEE Journal of Solid-State Circuits. 56, 1, p. 123-135 13 p., 9239376.Research output: Contribution to journal › Article › peer-review
1 Scopus citations -
EARRINGS: An efficient and accurate adapter trimmer entails no a priori adapter sequences
Wang, T. H., Huang, C. C. & Hung, J. H., 1 Jul 2021, In: Bioinformatics. 37, 13, p. 1846-1852 7 p.Research output: Contribution to journal › Article › peer-review
1 Scopus citations -
ECO Timing Optimization with Data Paths and Clock Paths Considered
Tang, J. X., Huang, S. H. & Hung, J. H., 2021, ISPACS 2021 - International Symposium on Intelligent Signal Processing and Communication Systems: 5G Dream to Reality, Proceeding. Institute of Electrical and Electronics Engineers Inc., (ISPACS 2021 - International Symposium on Intelligent Signal Processing and Communication Systems: 5G Dream to Reality, Proceeding).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review