Projects per year
Personal profile
Research Interests
Network biology, Bioinformatics, Systems biology, Single-cell analysis, Precision oncology
Experience
2019.8 – present
Assistant Professor
Institute of Bioinformatics and Systems Biology, National Chiao-Tung University, Hsinchu, Taiwan
2017.10 – 2019.7
JSPS Post-Doctoral Research Fellow/Guest Research Associate
Bioinformatics Center, Institute for Chemical Research, Kyoto University, Japan
2016.2 –2017.9
Assistant Research Fellow
Center for Bioinformatics Research, National Chiao Tung University, Hsinchu, Taiwan
2014.9 –2016.1
Post-Doctoral Research Fellow
Institute of Bioinformatics and Systems Biology, National Chiao-Tung University, Hsinchu, Taiwan
Awards
- MOST Grant for the Einstein Program, Taiwan
- BioICT Junior Chair Professor, National Chiao Tung University, Taiwan, 2018
- The best poster award, The 7th joint Conference on Informatics In Biology, Medicine and Pharmacology (IIBMP 2018), Japan, 2018
- JSPS Postdoctoral Fellowship for Research in Japan, 2017 (Selection Ratio = 125/1252 = 10%)
- The third place of poster competition, The 17th Biophysics Conference, 2012
- Outstanding performances in the poster contest of the college of biological and technology, National Chiao Tung University, Taiwan, 2010 and 2013
- The 1st place in my graduating class of the Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Taiwan, 2010
- Academic achievement award in the Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Taiwan, 2009
Education/Academic qualification
PhD, Bioinformatics and Systems Biology, National Yang Ming Chiao Tung University
2010 → 2014
Award Date: 31 Jul 2014
Master, Bioinformatics and Systems Biology, National Yang Ming Chiao Tung University
2008 → 2010
Award Date: 31 Jul 2010
Bachelor, Biotechnology, National Kaohsiung Normal University
2004 → 2008
Award Date: 31 Jul 2008
External positions
Center For Intelligent Drug Systems and Smart Bio-devices, Center for Intelligent Drug Systems and Smart Bio-devices (IDS2B)
1 Aug 2019 → …
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Collaborations and top research areas from the last five years
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Projects
- 4 Finished
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從患者個體至單細胞之癌症聚焦網路應用於開發個人化生物標記及癌症治療(4/5)
Lin, C.-Y. (PI)
1/09/22 → 31/08/23
Project: Government Ministry › Other Government Ministry Institute
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Comprehensive cancer-focused networks from individual patients to single cells for developing personalized biomarkers and cancer therapies
Lin, C.-Y. (PI)
1/09/21 → 31/08/22
Project: Government Ministry › Other Government Ministry Institute
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從患者個體至單細胞之癌症聚焦網路應用於開發個人化生物標記及癌症治療(2/5)
Lin, C.-Y. (PI)
1/09/20 → 31/08/21
Project: Government Ministry › Other Government Ministry Institute
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Comprehensive Cancer-focused Networks From Individual Patients To Single Cells for Developing Personalized Biomarkers And Cancer Therapies
Lin, C.-Y. (PI)
1/09/19 → 31/08/20
Project: Government Ministry › Other Government Ministry Institute
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G-cleave LC3B biosensor: monitoring autophagy and assessing resveratrol's synergistic impact on doxorubicin-induced apoptosis in breast cancer cells
Liao, C. C., Long, Y., Tsai, M. L., Lin, C. Y., Hsu, K. W. & Lee, C. H., Dec 2024, In: Breast Cancer Research. 26, 1, 190.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Gene set correlation enrichment analysis for interpreting and annotating gene expression profiles
Chang, L. Y., Lee, M. Z., Wu, Y., Lee, W. K., Ma, C. L., Chang, J. M., Chen, C. W., Huang, T. C., Lee, C. H., Lee, J. C., Tseng, Y. Y. & Lin, C. Y., 9 Feb 2024, In: Nucleic acids research. 52, 3, p. E17Research output: Contribution to journal › Article › peer-review
Open Access11 Scopus citations -
Inference of single-cell network using mutual information for scRNA-seq data analysis
Chang, L. Y., Hao, T. Y., Wang, W. J. & Lin, C. Y., Sep 2024, In: BMC Bioinformatics. 25, Suppl 2, 292.Research output: Contribution to journal › Article › peer-review
Open Access2 Scopus citations -
Unveiling IL6R and MYC as Targeting Biomarkers in Imatinib-Resistant Chronic Myeloid Leukemia through Advanced Non-Invasive Apoptosis Detection Sensor Version 2 Detection
Lee, C. H., Hsu, K. W., Hsieh, Y. Y., Li, W. T., Long, Y., Lin, C. Y. & Chen, S. H., Apr 2024, In: Cells. 13, 7, 616.Research output: Contribution to journal › Article › peer-review
1 Scopus citations -
Common Attractors in Multiple Boolean Networks
Cao, Y., Pi, W., Lin, C. Y., Munzner, U., Ohtomo, M. & Akutsu, T., 1 Sep 2023, In: IEEE/ACM Transactions on Computational Biology and Bioinformatics. 20, 5, p. 2862-2873 12 p.Research output: Contribution to journal › Article › peer-review
Prizes
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Academic achievement award in the Institute of Bioinformatics and Systems Biology, National Chiao Tung University
Lin, C.-Y. (Recipient), 2009
Prize: Honorary award
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BioICT Junior Chair Professor, National Chiao Tung University
Lin, C.-Y. (Recipient), 2018
Prize: Honorary award
-
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Outstanding performances in the poster contest of the college of biological and technology, National Chiao Tung University
Lin, C.-Y. (Recipient), 2010
Prize: Honorary award
-
Outstanding performances in the poster contest of the college of biological and technology, National Chiao Tung University
Lin, C.-Y. (Recipient), 2013
Prize: Honorary award